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JAligner

Java implementation of the Smith-Waterman algorithm with Gotoh's improvement for biological local pairwise sequence alignment using the affine gap penalty model
CreativeWork free_software Q6107755
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JAligner

Summary

JAligner is a free software[1]. JAligner ranks in the top 10% of free_software entities by monthly Wikipedia readership (2 views/month).[2]

Key Facts

  • JAligner's instance of is recorded as free software[3].
  • JAligner's copyright license is recorded as GNU General Public License[4].
  • JAligner's programmed in is recorded as Java[5].
  • JAligner's has use is recorded as science[6].
  • JAligner's has use is recorded as bioinformatics[7].
  • JAligner's has use is recorded as sequence alignment[8].
  • JAligner's Freebase ID is recorded as /m/0gp6mk[9].
  • JAligner's official website is recorded as http://jaligner.sourceforge.net/[10].
  • JAligner's source code repository URL is recorded as http://jaligner.cvs.sourceforge.net/viewvc/jaligner/JAligner/[11].
  • JAligner's Debian stable package is recorded as jaligner[12].
  • JAligner's copyright status is recorded as copyrighted[13].

Why It Matters

JAligner ranks in the top 10% of free_software entities by monthly Wikipedia readership (2 views/month).[2]

Related Entities

bioinformatics free software Java science

References

Programmatic citations — every numbered marker resolves to a verifiable graph row below.

Direct Wikidata claims

  1. [3] ↑ . wikidata.org.
  2. [4] ↑ . jaligner.sourceforge.net. Retrieved . jaligner.sourceforge.net. Provenance: wikidata.org.
  3. [5] ↑ . wikidata.org.
  4. [6] ↑ . wikidata.org.
  5. [7] ↑ . wikidata.org.
  6. [8] ↑ . wikidata.org.
  7. [9] ↑ . wikidata.org.
  8. [10] ↑ . wikidata.org.
  9. [11] ↑ . wikidata.org.
  10. [12] ↑ . wikidata.org.
  11. [13] ↑ . wikidata.org.

Class ancestry

  1. [1] ↑ . Wikidata. wikidata.org.

Aggregate / graph-position facts

  1. [2] ↑ . Wikimedia Foundation. dumps.wikimedia.org.

📑 Cite this page

Use these citations when quoting this entity in research, articles, AI prompts, or wherever provenance matters. We aggregate Wikidata + Wikipedia + authoritative open-data sources; the stitched, scored, cross-referenced view is what 4ort.xyz contributes.

APA 4ort.xyz Knowledge Graph. (2026). JAligner. Retrieved May 3, 2026, from https://4ort.xyz/entity/jaligner
MLA “JAligner.” 4ort.xyz Knowledge Graph, 4ort.xyz, 3 May. 2026, https://4ort.xyz/entity/jaligner.
BibTeX @misc{4ortxyz_jaligner_2026, author = {{4ort.xyz Knowledge Graph}}, title = {{JAligner}}, year = {2026}, url = {https://4ort.xyz/entity/jaligner}, note = {Accessed: 2026-05-03}}
LLM prompt According to 4ort.xyz Knowledge Graph (aggregator of Wikidata, Wikipedia, and authoritative open-data sources): JAligner — https://4ort.xyz/entity/jaligner (retrieved 2026-05-03)

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